Training materials
Keywords: Clinical data or Extras or Make or Ontologies or Visualisation or ansible
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hands-on tutorial
Ploting a Microbial Genome with Circos
• beginnerVisualisation -
slides
Visualisations in Galaxy
• beginnerVisualisation -
slides
JBrowse
• beginnerVisualisation -
slides
Friends Don't Let Friends Make Bad Graphs
• beginnerVisualisation -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Setting up Celery Workers for Galaxy
• beginnerGalaxy Server administration ansible git-gat