Training materials
Keywords: Clinical data or Europe PMC or Exploratory-analysis or Introduction bioinformatics or Systems or ansible or data-science
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Fundamental Skills in Bioinformatics
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Hands-on for 'Monitoring Galaxy and Pulsar with Sentry' tutorial
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hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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hands-on tutorial
Hands-on for 'Setting up Celery Workers for Galaxy' tutorial
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hands-on tutorial
Hands-on for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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hands-on tutorial
Hands-on for 'Python - Coding Style' tutorial
•• intermediatedata-science jupyter-notebook -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'Virtual Environments For Software Development' tutorial
•• intermediatedata-science jupyter-notebook