Training materials
Node: EMBL-EBI
and Keywords: Chip-seq or Europe PMC, Preprints or Exploratory-analysis or GFF3 or Institute of Food Research or Macromolecular structures or Ontologies or Open Targets or metagenomics
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e-learning
PDBe: Searching the Protein Data Bank
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e-learning
EMBL-EBI, programmatically: Take a REST from manual searches
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e-learning
Biomacromolecular structures: An introduction to EMBL-EBI resources
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e-learning
PDBePISA: Identifying and interpreting the likely biological assemblies of a protein structure
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e-learning
PDBe: Exploring a Protein Data Bank entry
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Video
Making cohort data FAIR
• beginnerData integration and warehousing Data management FAIR data Cohort data Ontologies Standards -
Life Science Literature Database, Life Sciences Literature Database
Using Europe PMC for effective literature research
• beginnerLiterature search peer reviewed articles Europe PMC, Preprints Data links Annotations Europe PMC, ORCID -
Video
Annotating data using next generation biobanking ontology (NGBO)
• beginnerData integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies
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