Training materials
Keywords: ChIP-seq or Clinical data or Data-format or Exploratory-analysis or R/Bioconductor or RNA-Seq or metagenomics
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Applied-Genomics-UTD/docs
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hands-on tutorial
Calculating α and β diversity from microbiome taxonomic data
• beginnerMetagenomics Microbial ecology Microbiome diversity metagenomics -
hands-on tutorial
Identification of the micro-organisms in a beer using Nanopore sequencing
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore -
hands-on tutorial
Taxonomic Profiling and Visualization of Metagenomic Data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling -
Video, Training materials, E-learning, Mock data
Advanced SPARQL queries and best practices
••• advancedComputer science Data management FAIR data Medical informatics Clinical data SPARQL Query data RDF Knowledge graph Inference Triplestore Ontology -
genome/bfx-workshop
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hands-on tutorial
Binning of metagenomic sequencing data
• beginnerMetagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy -
hands-on tutorial
Assembly of metagenomic sequencing data
• beginnerSequence assembly Metagenomics Assembly assembly metagenomics microgalaxy -
dputhier/EBA_2015_ChIP-Seq
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Functional-Genomics-Lab/Applied-Genomics