Training materials
Target audience: Students
and Keywords: ChIP-Seq or Exploratory-analysis or Statistical-model or Transcriptomics or life-sciences or metagenomics
46 materials found
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hands-on tutorial
Calculating α and β diversity from microbiome taxonomic data
• beginnerMetagenomics Microbial ecology Microbiome diversity metagenomics -
hands-on tutorial
Genome-wide alternative splicing analysis
••• advancedTranscriptomics alternative splicing isoform switching -
hands-on tutorial
Identification of the micro-organisms in a beer using Nanopore sequencing
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome beer citizen science metagenomics microgalaxy nanopore -
hands-on tutorial
Taxonomic Profiling and Visualization of Metagenomic Data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling -
hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Binning of metagenomic sequencing data
• beginnerMetagenomics Microbial ecology Sequence assembly Microbiome binning metagenomics microgalaxy -
hands-on tutorial
Assembly of metagenomic sequencing data
• beginnerSequence assembly Metagenomics Assembly assembly metagenomics microgalaxy -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics