Training materials
Operations: Data handling
and Keywords: Biomedical Literature or Clinical data or Data management planning or Sequence analysis or admin or single-cell
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Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD Interoperability -
Video, Training materials, Mock data, E-learning
RDF Schema and Data Visualization
• beginnerData visualisation Medical informatics FAIR data Data management Computer science Ontology visualisation Visualisation Data retrieval Data handling Query and retrieval Clinical data SPARQL Data visualization RDF Knowledge graph GraphDB Mock data -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, (Reviewing) Data Management Plans
• beginnerData management FAIR data Data handling Data management planning -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 2, Data security and privacy
• beginnerFAIR data Data management Data handling Data security Data privacy Data management planning -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 3, Introduction Wrap up
• beginnerFAIR data Data management Data handling Data management planning -
Slidedeck
Helis Academy course FAIR data stewardship 2021, Day 1, Institute requirements
• beginnerFAIR data Data management Data handling Analysis Data preserving Data reuse Data management planning Data sharing
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