Training materials
Keywords: Bioinformatics or microbiome or rmarkdown-notebook
and Target audience: Beginner or Industry or Professors or Students or medical students
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
E-Learning, Training materials
Biology meets Programming - Introduction to Bioinformatics using Python
• beginnerBioinformatics Biology Python Python biologists Programming Data Analysis Sequence Analysis -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
hands-on tutorial
Inferring single cell trajectories with Monocle3 (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
Documentation, Exercise, Handout, Scripts
ELB19F - Entry level Bioinformatics (First course in 2019)
• beginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
ELBS18 - Entry level Bioinformatics (Second course in 2018)
• beginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
ELB18F - Entry level Bioinformatics (First course in 2018)
• beginnerBioinformatics Sequencing
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