Training materials
Operations: Data handling
and Keywords: Anatomy Physiology and Atlases or Bioinformatics or Biomedical Literature or Interoperability or Roslin Institute or data protection
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e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD Interoperability -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases