Training materials
Keywords: 10x or DMP or ELIXIR-CONVERGE or Exploratory-analysis or Extras or Introduction or Ontologies or RNA-seq or Unix/Linux
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genome/bfx-workshop
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julien-roux/SIB_days_2024_workshop_EDI
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griffithlab/rnabio.org
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
material-share/material-share-single-cell-boot-camp
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lessons
Bring Your Own Data Management Plan