Training materials
Keywords: sensitive data or FAIR or FAIR data or Feature-summarisation or Ontologies or Populus-tremula or assembly or interactive-tools
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
hands-on tutorial
Antibiotic resistance detection
• beginnerMetagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial Resistance Microbiome amr assembly microgalaxy nanopore plasmids -
hands-on tutorial
Assembly of metagenomic sequencing data
• beginnerSequence assembly Metagenomics Assembly assembly metagenomics microgalaxy -
online course, Online material
Tools and Practices for FAIR Research Software
• beginnerFAIR FAIR Research Software -
Presentation
Workshop FAIR & Data stewardship for the ITN NUTRIOME project (2024)
• beginnerNutritional science Data management FAIR data Data handling Analysis data stewardship data life cycle Training FAIR Nutrition -
Make your research FAIRer with Quarto, GitHub and Zenodo
• beginnerFAIR data management reproducible research -
hands-on tutorial
FAIRification of an RNAseq dataset
•• intermediateFAIR clinical data -
Ready for BioData Management? Intensive Course
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hands-on tutorial
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerBioimaging FAIR REMBI -
hands-on tutorial
FAIR Bioimage Metadata
• beginnerFAIR bioimage Bioimage Metadata