Training materials
Keywords: sensitive data or 10x or Bioinformatics or Extras or HPC or Nextflow or R-programming or Shell or data sharing
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
Bioinformatics, Data Science
Teaching Bioinformatics through the Analysis of SARS-CoV-2
• beginnerBioinformatics SARS-CoV-2 assignments -
Bioinformatics, Computational Biology, Computer Science, Programming, Coding, Education, Data Science, Transcriptomics, Machine Learning
R for Data Science
•• intermediateBioinformatics Computational biology Machine learning Transcriptomics Computational Biology Coding Programming Data Science Data Analysis Computer Science Machine Learning -
Bioinformatics, Computational Biology, Computer Science, Programming, Coding, Education
R for Beginners
• beginnerBioinformatics Computational biology Computer science Coding Programming -
bioinformatics-core-shared-training/nextflow_september_2021
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Functional-Genomics-Lab/Applied-Genomics