Training materials
Include archived: true
and Scientific topics: Bioimaging or Genome annotation or Metabolomics or Natural language processing or Omics or Oncology or Statistics and probability
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
hands-on tutorial
Checking expected species and contamination in bacterial isolate
• beginnerEcology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod illumina jbrowse1 microgalaxy -
slides
Introduction to Metabolomics
• beginnerMetabolomics -
slides
Mass spectrometry: LC-MS preprocessing - advanced
• beginnerMetabolomics -
lcolladotor/cshl_rstats_genome_scale_2024
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Tutorial
NUTRIOME Workshop Tutorials
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sbwiecko/intuitive_biostatistics
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PAIR-code/understanding-umap