Training materials
Include archived: true
and Keywords: Clinical data or Introduction bioinformatics or Populus-tremula or bioinformatics or prokaryote
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hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
Tree thinking for tuberculosis evolution and epidemiology
• beginnerEvolutionary biology Genomics Microbiology Phylogeny Infectious disease Evolution microgalaxy one-health phylogenetics prokaryote -
hands-on tutorial
Identifying tuberculosis transmission links: from SNPs to transmission clusters
•• intermediateEvolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
slides
Genome annotation with Prokka
• beginnerGenome Annotation prokaryote -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote -
FREE online course
Making sense of genomic data: COVID-19 web-based bioinformatics
• beginnerbioinformatics NGS bioinformatics Next generation sequencing data analysis covid-19 sars-cov-2 coronavirus data-analysis data visualization genomics Genomic data pipelines Galaxy nexstrain -
Video, Training materials, E-learning
Expanding the SPHN RDF Schema
• beginnerOntology and terminology Medical informatics FAIR data Data management Computer science Data editing Ontology visualisation Visualisation Data handling Clinical data Data semantics FAIR Ontology editing Protegé RDF OWL -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology