Training materials
Difficulty level: Not specified
and Keywords: Data management planning or Data analysis or GFF3 or computer-science or covid19 or health-informatics
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Jan Pačes - SARS-CoV-2: Lectures from Evolutionary Biology
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WEBINAR: Getting started with R
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hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Automating Galaxy workflows using the command line' tutorial
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hands-on tutorial
Hands-on for 'SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis' tutorial
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slides
Slides for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
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slides
Slides for 'Introduction to SRA Aligned Read Format and Cloud Metadata for SARS-CoV-2' tutorial
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Access Bioinformatics Databases with Biopython
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Presentation
Reproducible data analysis with RStudio, github and Rmarkdown
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Bacterial Bioinformatics