Training materials
Difficulty level: Intermediate
and Scientific topics: Chemistry or Data management or Molecular interactions, pathways and networks or Sequence analysis or Statistics and probability
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
hands-on tutorial
Supervised Learning with Hyperdimensional Computing
•• intermediateStatistics and probability Statistics and machine learning -
Series of videos
Query Expansion services - tutorial
•• intermediateData management Data Query data Query expansion -
hands-on tutorial
Hands-on for 'Introduction to Machine Learning using R' tutorial
•• intermediatestatistics interactive-tools -
hands-on tutorial
Hands-on for 'Removal of human reads from SARS-CoV-2 sequencing data' tutorial
•• intermediatesequence-analysis covid19 -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Presentation
DSW Workshop for Finnish Data Support Personnel
•• intermediateData management DMP DMP tools data stewardship FAIR FAIR data -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling
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