Training materials
Difficulty level: Intermediate
and Resource type: Presentation or hands-on tutorial or Tutorial
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hands-on tutorial
FAIR data management solutions
•• intermediateFAIR Data management -
hands-on tutorial
Sequence data submission to ENA
•• intermediateFAIR ENA sequence datasets -
hands-on tutorial
Making clinical datasets FAIR
•• intermediateFAIR clinical data -
Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
hands-on tutorial
Hands-on for 'Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)' tutorial
•• intermediateMetabolomics metabolomics -
hands-on tutorial
Hands-on for 'Supervised Learning with Hyperdimensional Computing' tutorial
•• intermediateStatistics and probability statistics -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics