Training materials
Difficulty level: Intermediate
and Keywords: HPC or Population Genomics or RSE or Reproducible Science or prokaryote
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Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
podcast, slides
Byte-sized RSE Session 4: Continuous Integration
•• intermediateRSE Research software continuous integration coding skills -
Byte-sized RSE Session 3: Testing your Python code
•• intermediateRSE Research software Python coding skills testing -
podcast, slides
RSE Byte-sized RSE Session 2: Collaboration and Code Review via GitHub
•• intermediateRSE Research software code review -
Byte-sized RSE series
•• intermediateRSE coding skills Research software -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Identifying tuberculosis transmission links: from SNPs to transmission clusters' tutorial
•• intermediateevolution prokaryote one-health -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Tutorial
Tutorial on working with computing clusters
•• intermediateHPC
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