Training materials
Difficulty level: Intermediate
and Include archived: true
and Scientific topics: Ontology and terminology or Protein expression or Protein structure analysis or Sample collections or Sequence analysis or Workflows
-
Presentation
FAIRtracks and Omnipy – FAIRtracks interoperability story
•• intermediateData submission, annotation, and curation Data identity and mapping Data quality management Data governance Workflows Data handling -
Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Hands-on for 'Removal of human reads from SARS-CoV-2 sequencing data' tutorial
•• intermediatesequence-analysis covid19 -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
course materials
Learning structural bioinformatics and evolution with a snake puzzle
•• intermediateBioinformatics Evolutionary biology Molecular biology Protein structure analysis