Training materials
Difficulty level: Beginner
and Resource type: hands-on tutorial
and Scientific topics: Bioimaging or Biology or Data quality management or Genetic variation or Transcriptomics
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Introduction to Research Data Management
• beginnerData quality management Data submission, annotation, and curation Research Data Management Research Publishing -
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Inferring single cell trajectories with Monocle3
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Mapping and molecular identification of phenotype-causing mutations
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Identification of somatic and germline variants from tumor and normal sample pairs
• beginnerGenetic variation Variant Analysis