Training materials
Difficulty level: Beginner
and Keywords: Exploratory-analysis or metagenomics or Regex or IFR or R or FAIR data
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
lessons
RStudio Basic
• beginnerR R Studio -
Submitting, Finding and Downloading Raw Sequencing Data with ENA
• beginnerFAIR data Metadata Data submission -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
e-learning
Introduction to single cell RNAseq analysis workshop
• beginnerbioinformatics RNAseq single cell NGS python R -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• beginnerMetagenomics metagenomics assembly -
hands-on tutorial
Hands-on for 'Identification of the micro-organisms in a beer using Nanopore sequencing' tutorial
• beginnerMetagenomics metagenomics nanopore beer citizen science -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics