Training materials
Difficulty level: Beginner
and Keywords: RNA-Seq or Molecular or Single-cell sequencing or metadata or prokaryote
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lessons, e-learning
Introduction to Data Management Practices - Metadata
• beginnerData management FAIR data data organisation FAIR CONVERGE ontologies metadata Controlled vocabularies -
Tutorial, Video, Series of videos
Federated EGA: Introductory videos
• beginnerFederated EGA FEGA metadata ELIXIR-CONVERGE Phenotype SARS-CoV-2 -
hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
Hands-on for 'Tree thinking for tuberculosis evolution and epidemiology' tutorial
• beginnerevolution prokaryote one-health phylogenetics -
Slides
FAIR data - Module 3 (Metadata)
• beginnerBioinformatics Biology Data management Data handling metadata data annotation life science standards data sharing -
Slides
FAIR data - Module 1 (research data)
• beginnermetadata Data Life Cycle Reproducibility Data management plan -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
IFR Dockerised version of the EBI's Introduction to RNA-seq course
• beginnerRNA-Seq IFR Institute of Food Research Quadram Institute