Training materials
Difficulty level: Beginner
and Keywords: Data collection or Curation or Metadata or R or Reproducibility or data sharing
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
lessons
R basics
• beginnerInformatics Computer science R RStudio ggplot2 Rmarkdown Quarto dplyr data visualisation -
Open educational resource
I3D:bio's OMERO training material: Re-usable, adjustable, multi-purpose slides for local user training
• beginnerOMERO Research Data Management REMBI Microscopy data Metadata I3D:bio RDM4mic data organisation -
lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
lessons
RStudio Basic
• beginnerR R Studio -
Submitting, Finding and Downloading Raw Sequencing Data with ENA
• beginnerFAIR data Metadata Data submission -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
hands-on tutorial
Inferring single cell trajectories with Monocle3 (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Introduction to single cell RNAseq analysis workshop
• beginnerbioinformatics RNAseq single cell NGS python R