Training materials
Difficulty level: Beginner
and Keywords: Annotation or Data integration or EeLP or Interoperability or metadata
and Resource type: Computer Software or Video or e-learning or educational materials
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e-learning
Identifiers in Bioinformatics
• beginnerData management Data identity and mapping Data handling Data retrieval Database search Interoperability Identifiers Standards -
e-learning
Interoperable File Formats
• beginnerData management Formatting Interoperability File formats Standards -
e-learning
Vocabularies for bioinformatics
• beginnerBioinformatics Data management Data submission, annotation, and curation Data handling Data retrieval Database search Ontologies Interoperability Standardised vocabulary Standards -
lessons, e-learning
Introduction to Data Management Practices - Metadata
• beginnerData management FAIR data data organisation FAIR CONVERGE ontologies metadata Controlled vocabularies -
Tutorial, Video, Series of videos
Federated EGA: Introductory videos
• beginnerFederated EGA FEGA metadata ELIXIR-CONVERGE Phenotype SARS-CoV-2 -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD Interoperability -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration
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