Training materials
Keywords: Bioinformatics or Single Cell
and Contributors: Martin Čech or Mehmet Tekman or Pedro Fernandes or Rafael C Jimenez or Software Carpentry
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hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Understanding Barcodes
• beginnerTranscriptomics Single Cell -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell -
slides
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics Single Cell -
slides
Dealing with Cross-Contamination in Fixed Barcode Protocols
• beginnerTranscriptomics Single Cell -
slides
An introduction to scRNA-seq data analysis
•• intermediateTranscriptomics Single Cell -
Documentation, Exercise, Handout, Scripts
ELB19F - Entry level Bioinformatics (First course in 2019)
• beginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
ELBS18 - Entry level Bioinformatics (Second course in 2018)
• beginnerBioinformatics Sequencing -
Documentation, Exercise, Handout, Scripts
ELB18F - Entry level Bioinformatics (First course in 2018)
• beginnerBioinformatics Sequencing