Training materials
Scientific topics: Bioinformatics or Gene expression and microarray or Metabolome or Transcriptomics
and Contributors: Markus Wolfien or Wendi Bacon or Wolmar Nyberg Åkerström or bioinformatics.ca
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bioinformaticsdotca/MET_2023
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bioinformaticsdotca/PNA_2023
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bioinformaticsdotca/RNA_2023
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bioinformaticsdotca/scRNA_2023
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lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot -
hands-on tutorial
Inferring single cell trajectories with Monocle3
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
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hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Bulk RNA Deconvolution with MuSiC
• beginnerTranscriptomics Single Cell transcriptomics -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell
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