Training materials
Keywords: R or Sequence analysis
and Contributors: Helena Rasche or Marius van den Beek or Mark Beaumont or Thomas Duigou or Vivek Bhardwaj or cambiotraining
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Screening assembled genomes for contamination using NCBI FCS
• beginnerSequence analysis -
cambiotraining/corestats
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hands-on tutorial
Inferring single cell trajectories with Monocle3 (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Mapping
• beginnerSequence analysis Mapping