Training materials
Keywords: Data analysis or FAIR or Galaxy Server administration or HPC or contributing or jupyter-notebook
and Contributors: Helena Rasche or Janina Müller
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
slides
Galaxy and Celery
• beginnerGalaxy Server administration -
hands-on tutorial
FAIR data management solutions
•• intermediateFAIR Data management -
hands-on tutorial
RO-Crate in Python
• beginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Customizing the look of Galaxy (Manual)
• beginnerGalaxy Server administration -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Customizing the look of Galaxy
• beginnerGalaxy Server administration git-gat -
hands-on tutorial
Setting up Celery Workers for Galaxy
• beginnerGalaxy Server administration ansible git-gat