Training materials
Keywords: Python or R-programming or Systems or bash or galaxy-interface
and Contributors: Helena Rasche or Icahn School of Medicine at Mount Sinai or Sundeep Agarwal
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shawnrhoads/gu-psyc-347
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learnbyexample/100_page_python_intro
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learnbyexample/practice_python_projects
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learnbyexample/py_regular_expressions
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hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
CLI Educational Game - Bashcrawl
•• intermediateSoftware engineering Foundations of Data Science bash game jupyter-notebook -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook