Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Gildas Le Corguillé or Michael Krone or Oliver Davis or Prof. Tom Freeman or Roland Krause or Sergio Martínez Cuesta
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hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
hands-on tutorial
Mass spectrometry: LC-MS analysis
• beginnerMetabolomics -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Galaxy Installation with Ansible
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat -
slides
Introduction to 'Metabolomics'
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Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Presentation
Introduction to FAIR principles
• beginnerFAIR data