Training materials
Contributors: Dr. Nils Gehlenborg or Gildas Le Corguillé or Jean-François Dufayard or Ms. Yo Yehudi or Simon Gladman or Software Carpentry
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swcarpentry/matlab-novice-inflammation
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swcarpentry/make-novice
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swcarpentry/r-novice-gapminder
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swcarpentry/python-novice-inflammation
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swcarpentry/shell-novice
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swcarpentry/git-novice
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slides
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerGalaxy Server administration -
hands-on tutorial
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote