Training materials
Contributors: Dr. Bernard de Bono or Helena Rasche or Jaime Morris or Jyoti Khadake or Lucille Delisle or Martin Hubalek or Mehmet Tekman or Michael Krone or Prof. Tom Freeman or Wolmar Nyberg Åkerström
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hands-on tutorial
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
• beginnerFAIR Data, Workflows, and Research data management plan fair open -
slides
Galaxy Administrator Time Burden and Technology Usage
• beginnerGalaxy Server administration deploying maintenance survey -
hands-on tutorial
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• beginnerEcology Data Paper EML FAIR Metadata -
hands-on tutorial
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
hands-on tutorial
Converting NCBI Data to the AnnData Format
• beginnerSingle Cell data import data management -
hands-on tutorial
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
hands-on tutorial
FAIR in a nutshell
• beginnerFAIR Data, Workflows, and Research data stewardship fair open -
hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Creating high resolution images of Galaxy Workflows
• beginnerUsing Galaxy and Managing your Data workflows -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication