Training materials
Difficulty level: Beginner
and Contributors: Delphine Lariviere or Emily Angiolini or Luigi Grassi or Matthias Fahrner or Melanie Foell or Nicola Mulder or Prof. Tom Freeman or Roland Krause or Wendi Bacon
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hands-on tutorial
Scanpy Parameter Iterator
• beginnerSingle Cell -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerassembly prokaryote -
hands-on tutorial
Hands-on for 'Label-free data analysis using MaxQuant' tutorial
• beginnerproteomics DDA label-free -
hands-on tutorial
Use Jupyter notebooks in Galaxy
• beginnerUsing Galaxy and Managing your Data -
slides
Plates, Batches, and Barcodes
• beginnerTranscriptomics Single Cell -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Presentation
Introduction to FAIR principles
• beginnerFAIR data -
Training materials
Summer School 2018 TrainMalta: Epigenomics. Introduction to Unix and R
• beginnerUnix R-programming -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy