Training materials
Contributors: David Bouyssié or Dr. Paul Shaw or Dr. Steve Jupe or Laura Leroi or Marius van den Beek or Sabine Österle or Simon Bray or Software Carpentry
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swcarpentry/matlab-novice-inflammation
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swcarpentry/make-novice
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swcarpentry/r-novice-gapminder
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swcarpentry/python-novice-inflammation
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swcarpentry/shell-novice
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swcarpentry/git-novice
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook