Training materials
Target audience: Students or bioinformaticians
and Contributors: David Bouyssié or David Castillo or Eija Korpelainen or Markus Englund or The Carpentries or Workflow4Metabolomics core team
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Python - Flow Control
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Loops
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Basic Types & Type Conversion
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
Plotting in Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Functions
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook