Training materials
Contributors: Daniel Sobral or Eija Korpelainen or Eva Freyhult or Hadley Wickham or Michael Krone or Pip Griffin or Prof. Tom Freeman or Saskia Hiltemann
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
ekorpela/cloud-vm-workshop
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hadley/r-pkgs
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hadley/ggplot2-book
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hadley/mastering-shiny
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hadley/adv-r
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hadley/r4ds