Training materials
Scientific topics: Data structures
and Contributors: Daniel Sobral or Dr. Nils Gehlenborg or Erasmus+ Programme or Fabien Mareuil or Gautier Sarah or Pavankumar Videm or Sundeep Agarwal or bioinformatics.ca
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hands-on tutorial
CLI Educational Game - Bashcrawl
•• intermediateSoftware engineering Foundations of Data Science bash game jupyter-notebook -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
Plotting in Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
SQL Educational Game - Murder Mystery
•• intermediateSoftware engineering Foundations of Data Science SQL game jupyter-notebook -
hands-on tutorial
Advanced R in Galaxy
•• intermediateSoftware engineering Foundations of Data Science R -
hands-on tutorial
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Introduction to Python
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Advanced Python
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
slides
Scripting Galaxy using the API and BioBlend
• beginnerSoftware engineering Development in Galaxy