Training materials
Contributors: Daniel Blankenberg or Kaivan Kamali or Mehmet Tekman or Michael Parkin or Nene Barry or SIB Swiss Institute of Bioinformatics or The Gulbenkian Training Programme in Bioinforma... or Toby Hodges
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
sib-swiss/spatial-transcriptomics-training
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sib-swiss/reproducible-analysis-training
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sib-swiss/ena-seqdata-training
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GTPB/ABSTAT18
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sib-swiss/Introduction-FAIR-RDM-DMP
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GTPB/PDA19
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GTPB/IBIP19
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sib-swiss/Data-analysis-in-practice