Training materials
Contributors: Daniel Blankenberg or Dr. Alexander Lex or Dr. Jim Procter or Eija Korpelainen or John Chilton or Jyoti Khadake or Michael Ball or Nicola Soranzo or Praveen Kumar or Sonika Tyagi or Vicky Schneider
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Debugging Galaxy
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Contributing a New Feature to Galaxy Core
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Writing Automated Tests for Galaxy
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis' tutorial
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hands-on tutorial
Text-mining with the SimText toolset
• beginnerStatistics and probability Statistics and machine learning interactive-tools -
hands-on tutorial
metaQuantome 3: Taxonomy
•• intermediateProteomics Proteogenomics Metatranscriptomics Microbial ecology Metagenomics Taxonomy microgalaxy