Training materials
Difficulty level: Intermediate
and Contributors: Cyril Pommier or Donny Vrins or Dr. Colin Combe or Mikko Rautiainen or Nuwan Goonasekera or Sabine Österle
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Online material, online course
Workshop on Resources for Plant Sciences, 2023
•• intermediatePlant biology service bundle eLearning EeLP plant science Data Visualization Gene Ontology Knowledge graph MIAPPE -
hands-on tutorial
Hands-on for 'Managing Galaxy on Kubernetes' tutorial
•• intermediateadmin kubernetes -
hands-on tutorial
Hands-on for 'Galaxy Installation on Kubernetes' tutorial
•• intermediateadmin kubernetes -
hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Globbing' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Python - Argparse
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics
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