Training materials
Contributors: Cristóbal Gallardo or Emily Angiolini or Jason Williams or Martin Strauch or Mr. William Edward Hill or Niclas Jareborg or Pavankumar Videm or Prof. Tom Freeman or Stephen Taylor or Wendi Bacon or bioinformatics.ca
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Scanpy Parameter Iterator
• beginnerSingle Cell -
bioinformaticsdotca/BMB_2024
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bioinformaticsdotca/AMB_2024
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bioinformaticsdotca/IDE_2024
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video
RDMbites | Decolonising data management in the biosciences
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video
RDMbites | Data management and disabilities