Training materials
Contributors: Coline Royaux or Daniel Faria or Guillaume Gricourt or Lucille Delisle or Martin Krzywinski or Mehmet Tekman or Praveen Kumar or Sundeep Agarwal
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
learnbyexample/100_page_python_intro
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learnbyexample/cli_text_processing_coreutils
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learnbyexample/learn_gnused
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learnbyexample/practice_python_projects
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learnbyexample/learn_gnugrep_ripgrep
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learnbyexample/cli-computing
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learnbyexample/learn_gnuawk