Training materials
Contributors: Coline Royaux or Célia Michotey or Dr. Konstantinos Sidiropoulos or Dr. Roland Schwarz or Erwan Corre or Fotis E. Psomopoulos or Instituto Gulbenkian de Ciência or Pavankumar Videm or Teaching materials at the Harvard Chan Bioinfor...
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
GTPB/ABSTAT18
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GTPB/IBIP19
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GTPB/PDA19
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hbctraining/BBS230B_2023
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hbctraining/RNA-seq-CB321qc_2022