Training materials
Difficulty level: Beginner
and Resource type: hands-on tutorial
and Contributors: Clemens Blank or Diana Pilvar or Dilmurat Yusuf or Emily Angiolini or Jamie Edwards or Luigi Grassi or Prof. Tom Freeman or Simon Gladman
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hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Metaproteomics tutorial
• beginnerProteomics Proteogenomics Biodiversity Taxonomy microgalaxy -
hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools -
hands-on tutorial
Reference Data with CVMFS without Ansible
• beginnerGalaxy Server administration -
hands-on tutorial
Upgrading Galaxy
• beginnerGalaxy Server administration ansible
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