Training materials
Difficulty level: Beginner
and Contributors: Christopher Barnett or Dr. Colin Combe or Dr. Iain Milne or Erasmus+ Programme or Vilem Ded
-
hands-on tutorial
Genomic Data Visualisation with JBrowse
• beginnerVisualisation gmod jbrowse1 -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
RNA Seq Counts to Viz in R
• beginnerTranscriptomics interactive-tools -
hands-on tutorial
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
Introduction to Python
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
RStudio in Galaxy
• beginnerUsing Galaxy and Managing your Data interactive-tools -
hands-on tutorial
Galaxy Basics for everyone
• beginnerIntroduction to Galaxy Analyses -
slides
Circos
• beginnerVisualisation -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
hands-on tutorial
Quality Control
• beginnerSequence analysis
- 1
- 2