Training materials
Difficulty level: Beginner
and Contributors: Christophe Klopp or Eija Korpelainen or Michael Krone or Patricia Palagi or Prof. Tom Freeman or Susan Coort or The Carpentries or Tuur Muyldermans
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
hands-on tutorial
Live Coding is a Skill
• beginnerTeaching and Hosting Galaxy training -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Hands-on for 'Python - Flow Control' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Loops' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Basic Types & Type Conversion' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Functions' tutorial
• beginnerdata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'CLI basics' tutorial
• beginnerdata-science bash jupyter-notebook
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