Training materials
Contributors: Christophe Antoniewski or Felix Almonte or Maria Doyle or Mehmet Tekman or Prof. Tom Freeman or Sabine Österle or Susan Coort
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Hands-on for 'Comparing inferred cell compositions using MuSiC deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'CRISPR screen analysis' tutorial
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hands-on tutorial
Hands-on for 'ATAC-Seq data analysis' tutorial
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hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
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hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Visualization of RNA-Seq results with Volcano Plot in R' tutorial
•• intermediatetranscriptomics interactive-tools