Training materials
Contributors: Christophe Antoniewski or Data Carpentry or Dr. Alexander Lex or Helena Rasche or Lucille Delisle or UC Davis Bioinformatics Core Training Page
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hands-on tutorial
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
• beginnerFAIR Data, Workflows, and Research data management plan fair open -
slides
Galaxy Administrator Time Burden and Technology Usage
• beginnerGalaxy Server administration deploying maintenance survey -
hands-on tutorial
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• beginnerEcology Data Paper EML FAIR Metadata -
hands-on tutorial
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
hands-on tutorial
Converting NCBI Data to the AnnData Format
• beginnerSingle Cell data import data management -
hands-on tutorial
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
hands-on tutorial
FAIR in a nutshell
• beginnerFAIR Data, Workflows, and Research data stewardship fair open -
hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
Creating high resolution images of Galaxy Workflows
• beginnerUsing Galaxy and Managing your Data workflows -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication