Training materials
Difficulty level: Beginner
and Contributors: Christoph Stritt or Christophe Klopp or Emily Angiolini or Jamie Edwards or Luigi Grassi or Our list of contributors can be found on our co... or Prof. Tom Freeman or Roland Krause
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FREE online course
A Practical Guide for SARS-CoV-2 Whole Genome Sequencing Join now
• beginnerSequencing Best Practices quality control Genomics Metagenomics Genomic data library preparation sars-cov-2 covid-19 surveillance -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Tree thinking for tuberculosis evolution and epidemiology' tutorial
• beginnerevolution prokaryote one-health phylogenetics -
FREE online course
Making sense of genomic data: COVID-19 web-based bioinformatics
• beginnerbioinformatics NGS bioinformatics Next generation sequencing data analysis covid-19 sars-cov-2 coronavirus data-analysis data visualization genomics Genomic data pipelines Galaxy nexstrain -
FREE online course
The Power of Genomics to Understand the COVID-19 Pandemic
• beginnercoronavirus covid-19 sars-cov-2 mutations Variant calling Sequencing pandemic surveillance genomics public health Genomic data -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Presentation
Introduction to FAIR principles
• beginnerFAIR data -
Training materials
Summer School 2018 TrainMalta: Epigenomics. Introduction to Unix and R
• beginnerUnix R-programming -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy