Training materials
Contributors: Celia van Gelder or Dr. Simon Andrews or Eija Korpelainen or Jamie Edwards or Laurent Gatto or Lucille Delisle or Manimozhiyan Arumugam or Marek Vrbacky or Stephen Taylor or Wendi Bacon
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Scanpy Parameter Iterator
• beginnerSingle Cell -
hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
video
RDMbites | Decolonising data management in the biosciences
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video
RDMbites | Data management and disabilities
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video
RDMbites | EDIJ and decolonisation in data management
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video
RDMbites | EDIJ and decolonisation in data management: why should I care?
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Inferring single cell trajectories with Monocle3 (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Removing the effects of the cell cycle
• beginner10x Single Cell