Training materials
Difficulty level: Beginner
and Contributors: Celia van Gelder or Dr. Sean I O’Donoghue or Emma Leith or Erwan Corre or Jamie Edwards or Manimozhiyan Arumugam or Marek Vrbacky or PhD BSc FSB
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy